STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_01110Putative myosin heavy chain, embryonic smooth muscle isoform. (623 aa)    
Predicted Functional Partners:
ATG8
Autophagy-related protein.
    
 0.759
CLCR_02725
Leucine rich repeat protein.
     
 0.637
CLCR_02357
Baculoviral IAP repeat-containing 2/3/4.
     
 0.629
PAC1
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
   
 
  0.593
CLCR_08814
BZIP domain-containing protein.
    
  0.592
CLCR_10902
Ubiquitin-40S ribosomal protein S27a.
    
  0.592
CDC31
Cell division control protein 31.
    
  0.586
CETN1
Centrin-1.
    
  0.586
CLCR_05714
Uncharacterized protein.
    
 0.578
CLCR_05253
Uncharacterized protein.
    
 0.578
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.