STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPI16GPI transamidase component GPI16. (612 aa)    
Predicted Functional Partners:
CLCR_01889
Putative GPI transamidase component PIG-S.
   
 0.998
GPI8
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 0.998
GAA1
GPI transamidase component GAA1.
   
 0.998
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U protein.
   
 0.994
bst1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 0.894
GPI13
GPI ethanolamine phosphate transferase 3.
    
 0.893
tsc10
3-ketodihydrosphingosine reductase tsc10.
     
 0.891
CLCR_04210
Putative GPI-anchor biosynthesis protein (Pig-F).
     
 0.891
las21
GPI ethanolamine phosphate transferase 2.
    
 0.888
mcd4
GPI ethanolamine phosphate transferase 1.
    
 0.763
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.