STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_011903-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (427 aa)    
Predicted Functional Partners:
CLCR_03711
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.998
CLCR_08727
Malonyl CoA-acyl carrier protein transacylase.
 
 0.995
cut6
Acetyl-CoA carboxylase.
  
 
 0.959
hcs1
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 
 0.923
CLCR_11311
Uncharacterized protein.
  
 0.916
nodG
Nodulation protein G.
   
 0.904
kduD-3
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
 
 
 0.904
CLCR_02153
Thioesterase family protein.
    
 0.903
etr1
Putative trans-2-enoyl-CoA reductase, mitochondrial.
   
 
 0.901
CAB5
Dephospho-CoA kinase CAB5.
    
 0.895
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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