STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_01060DDT domain protein. (1031 aa)    
Predicted Functional Partners:
ISW2
ISWI chromatin-remodeling complex ATPase ISW2.
    
 0.989
CLCR_07230
DNA polymerase epsilon subunit 3.
    
 
 0.959
Hells
Lymphocyte-specific helicase.
    
 0.926
ALG8
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
 
      0.899
htb1
Histone H2B; Belongs to the histone H2B family.
    
 0.828
hrp3
Chromodomain helicase hrp3.
   
 0.792
CLCR_06590
Putative DNA excision repair protein (Rad26L).
    
 0.778
rhp26
DNA repair protein rhp26.
    
 0.778
CLCR_09509
Putative DNA polymerase V.
    
 0.754
prp10
U2 snRNP component prp10.
   
 0.745
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.