STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NDE1Nuclear distribution protein nudE 1. (621 aa)    
Predicted Functional Partners:
PAC1
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
    
 
 0.959
nudC
Nuclear movement protein nudC.
     
 0.830
Dync1i2
Cytoplasmic dynein 1 intermediate chain 2.
    
 
 0.753
CLCR_05996
Mitotic checkpoint protein BUB3.2.
     
 0.729
PHO85
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.691
CLCR_10990
Protein kinase domain-containing protein.
    
 0.691
CLCR_10754
Putative Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.691
CLCR_00547
Checkpoint serine/threonine-protein kinase.
    
  0.683
CLCR_05265
Uncharacterized protein.
    
 0.673
CLCR_05212
Uncharacterized protein.
    
 0.673
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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