STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dis3Exosome complex exonuclease dis3; Belongs to the RNR ribonuclease family. (1006 aa)    
Predicted Functional Partners:
Exosc1
Exosome complex component CSL4.
   
 0.998
RRP40
Exosome complex component RRP40.
   
 0.998
rrp4
Exosome complex component rrp4.
   
 0.998
rrp45
Exosome complex component rrp45.
   
 0.997
CLCR_04290
RNase_PH domain-containing protein.
   
 0.997
SKI6
Exosome complex component SKI6.
   
 0.997
CLCR_07363
RNase_PH domain-containing protein.
   
 0.997
CLCR_00293
3' exoribonuclease family protein.
   
 0.997
CLCR_06105
3' exoribonuclease family protein.
   
 0.994
CLCR_00062
Putative exosome-associated protein.
   
 
 0.990
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.