STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
srs2ATP-dependent DNA helicase srs2. (1028 aa)    
Predicted Functional Partners:
rhp51
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
  
 
 0.980
CLCR_01028
Bloom syndrome protein.
  
 0.977
recQ
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.977
rhp57
DNA repair protein rhp57.
  
 
 0.960
rad5
DNA repair protein rad5.
   
 
 0.954
uvsH
Postreplication repair E3 ubiquitin-protein ligase rad18.
    
 
 0.953
RHM52
DNA repair and recombination protein rhm52.
    
 
 0.952
CLCR_08547
Rad51 domain-containing protein.
  
 
 0.946
CLCR_03993
Vezatin domain-containing protein.
  
 
 0.941
pcn1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.941
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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