STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02016Putative Fe superoxide dismutase. (342 aa)    
Predicted Functional Partners:
MRPS5
37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.970
CLCR_02540
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.967
CLCR_04296
Mitochondrial 37S ribosomal protein RSM18.
   
 
 0.967
CLCR_05968
Uncharacterized protein.
   
 
 0.966
CLCR_06056
Mitochondrial 54S ribosomal protein YmL10/YmL18.
   
 
 0.965
CLCR_03542
Mitochondrial 37S ribosomal protein MRP4.
   
 
 0.965
CLCR_04247
Aconitate hydratase.
   
 
 0.964
MRPS16
37S ribosomal protein S16, mitochondrial.
   
 
 0.961
CLCR_00644
Uncharacterized protein.
   
   0.957
CLCR_01193
Mitochondrial 54S ribosomal protein YmL17/YmL30.
   
 
 0.955
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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