STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02344Uncharacterized protein. (613 aa)    
Predicted Functional Partners:
CLCR_09074
Uncharacterized protein.
    
 0.704
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.637
esa1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.623
CLCR_01038
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.623
CLCR_03512
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.623
CLCR_04525
PHD finger domain protein.
    
 0.584
CLCR_09441
Putative PHD finger and BAH domain protein (Snt2).
    
 0.584
TRA1
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.557
hat2
Histone acetyltransferase type B subunit 2.
    
 0.522
epl1
Enhancer of polycomb-like protein.
    
 0.520
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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