Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADE4 | CLCR_01156 | A0A1C1CPV8 | A0A1C1CCF3 | Amidophosphoribosyltransferase. | Ribose-phosphate pyrophosphokinase 1. | 0.864 |
ADE4 | HIS1 | A0A1C1CPV8 | A0A1C1CE75 | Amidophosphoribosyltransferase. | ATP phosphoribosyltransferase. | 0.605 |
ADE4 | PRS5 | A0A1C1CPV8 | A0A1C1CEY0 | Amidophosphoribosyltransferase. | Ribose-phosphate pyrophosphokinase 5. | 0.864 |
CLCR_01156 | ADE4 | A0A1C1CCF3 | A0A1C1CPV8 | Ribose-phosphate pyrophosphokinase 1. | Amidophosphoribosyltransferase. | 0.864 |
CLCR_01156 | CLCR_02413 | A0A1C1CCF3 | A0A1C1CFL3 | Ribose-phosphate pyrophosphokinase 1. | 3-hydroxyisobutyrate dehydrogenase. | 0.863 |
CLCR_01156 | CLCR_03066 | A0A1C1CCF3 | A0A1C1D171 | Ribose-phosphate pyrophosphokinase 1. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.863 |
CLCR_01156 | CLCR_05499 | A0A1C1CCF3 | A0A1C1C954 | Ribose-phosphate pyrophosphokinase 1. | Putative transketolase. | 0.867 |
CLCR_01156 | CLCR_09207 | A0A1C1CCF3 | A0A1C1CR70 | Ribose-phosphate pyrophosphokinase 1. | Putative ribose 5-phosphate isomerase. | 0.853 |
CLCR_01156 | DIN4 | A0A1C1CCF3 | A0A1C1C6G6 | Ribose-phosphate pyrophosphokinase 1. | 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial. | 0.909 |
CLCR_01156 | HIS1 | A0A1C1CCF3 | A0A1C1CE75 | Ribose-phosphate pyrophosphokinase 1. | ATP phosphoribosyltransferase. | 0.860 |
CLCR_01156 | PDB1 | A0A1C1CCF3 | A0A1C1CR72 | Ribose-phosphate pyrophosphokinase 1. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.909 |
CLCR_01156 | PRS5 | A0A1C1CCF3 | A0A1C1CEY0 | Ribose-phosphate pyrophosphokinase 1. | Ribose-phosphate pyrophosphokinase 5. | 0.942 |
CLCR_01156 | RBK1 | A0A1C1CCF3 | A0A1C1CVA9 | Ribose-phosphate pyrophosphokinase 1. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.863 |
CLCR_02413 | CLCR_01156 | A0A1C1CFL3 | A0A1C1CCF3 | 3-hydroxyisobutyrate dehydrogenase. | Ribose-phosphate pyrophosphokinase 1. | 0.863 |
CLCR_02413 | CLCR_03066 | A0A1C1CFL3 | A0A1C1D171 | 3-hydroxyisobutyrate dehydrogenase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.960 |
CLCR_02413 | CLCR_05499 | A0A1C1CFL3 | A0A1C1C954 | 3-hydroxyisobutyrate dehydrogenase. | Putative transketolase. | 0.919 |
CLCR_02413 | CLCR_09207 | A0A1C1CFL3 | A0A1C1CR70 | 3-hydroxyisobutyrate dehydrogenase. | Putative ribose 5-phosphate isomerase. | 0.494 |
CLCR_02413 | DIN4 | A0A1C1CFL3 | A0A1C1C6G6 | 3-hydroxyisobutyrate dehydrogenase. | 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial. | 0.865 |
CLCR_02413 | PDB1 | A0A1C1CFL3 | A0A1C1CR72 | 3-hydroxyisobutyrate dehydrogenase. | Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.865 |
CLCR_02413 | PRS5 | A0A1C1CFL3 | A0A1C1CEY0 | 3-hydroxyisobutyrate dehydrogenase. | Ribose-phosphate pyrophosphokinase 5. | 0.863 |
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