Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_01502 | CLCR_02405 | A0A1C1CAK3 | A0A1C1CF91 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Amidohydrolase. | 0.485 |
CLCR_01502 | CLCR_02466 | A0A1C1CAK3 | A0A1C1CF44 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Putative TLC domain-containing protein. | 0.485 |
CLCR_01502 | CLCR_04261 | A0A1C1CAK3 | A0A1C1CIU0 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.598 |
CLCR_01502 | CLCR_05846 | A0A1C1CAK3 | A0A1C1C9G7 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Serine/threonine-protein phosphatase. | 0.426 |
CLCR_01502 | CLCR_06068 | A0A1C1CAK3 | A0A1C1CA42 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Serine/threonine-protein phosphatase. | 0.423 |
CLCR_01502 | CLCR_09528 | A0A1C1CAK3 | A0A1C1CX66 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Phosphoinositide 3-phosphatase. | 0.646 |
CLCR_01502 | MYO2 | A0A1C1CAK3 | A0A1C1D1W9 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.659 |
CLCR_01502 | cut15 | A0A1C1CAK3 | A0A1C1C8W0 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Importin subunit alpha; Belongs to the importin alpha family. | 0.658 |
CLCR_01502 | tubA | A0A1C1CAK3 | A0A1C1CTX3 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.598 |
CLCR_02405 | CLCR_01502 | A0A1C1CF91 | A0A1C1CAK3 | Amidohydrolase. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.485 |
CLCR_02405 | CLCR_02466 | A0A1C1CF91 | A0A1C1CF44 | Amidohydrolase. | Putative TLC domain-containing protein. | 0.558 |
CLCR_02405 | CLCR_04261 | A0A1C1CF91 | A0A1C1CIU0 | Amidohydrolase. | Uncharacterized protein. | 0.406 |
CLCR_02405 | CLCR_05846 | A0A1C1CF91 | A0A1C1C9G7 | Amidohydrolase. | Serine/threonine-protein phosphatase. | 0.412 |
CLCR_02405 | CLCR_06068 | A0A1C1CF91 | A0A1C1CA42 | Amidohydrolase. | Serine/threonine-protein phosphatase. | 0.412 |
CLCR_02405 | CLCR_09528 | A0A1C1CF91 | A0A1C1CX66 | Amidohydrolase. | Phosphoinositide 3-phosphatase. | 0.485 |
CLCR_02405 | MYO2 | A0A1C1CF91 | A0A1C1D1W9 | Amidohydrolase. | Myosin-2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.485 |
CLCR_02405 | cut15 | A0A1C1CF91 | A0A1C1C8W0 | Amidohydrolase. | Importin subunit alpha; Belongs to the importin alpha family. | 0.479 |
CLCR_02405 | tubA | A0A1C1CF91 | A0A1C1CTX3 | Amidohydrolase. | Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. | 0.406 |
CLCR_02466 | CLCR_01502 | A0A1C1CF44 | A0A1C1CAK3 | Putative TLC domain-containing protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.485 |
CLCR_02466 | CLCR_02405 | A0A1C1CF44 | A0A1C1CF91 | Putative TLC domain-containing protein. | Amidohydrolase. | 0.558 |
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