STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
katAVegetative catalase. (596 aa)    
Predicted Functional Partners:
SCP2
Fatty acid-binding protein.
   
 0.867
SCP2-2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.867
SCP2-3
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.867
CLCR_03092
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
  
 0.767
PAY32
Peroxisomal targeting signal receptor.
    
 0.754
CLCR_11311
Uncharacterized protein.
   
 0.729
SOD4
Cell surface superoxide dismutase [Cu-Zn] 4.
  
 0.692
CLCR_02493
Putative peroxisomal membrane anchor protein (Pex14).
    
  0.690
UBI4
Polyubiquitin.
    
  0.667
CLCR_03846
Peroxisomal hydratase-dehydrogenase-epimerase.
   
 0.655
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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