STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02688Uncharacterized protein. (97 aa)    
Predicted Functional Partners:
CLCR_09677
Tryptophan synthase.
    
 0.904
CLCR_01936
Putative squalene synthase.
  
 0.878
fpp
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.860
mvd1
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.833
CYB2
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
  
 
 0.818
CYB2-2
Cytochrome b2, mitochondrial.
  
 
 0.818
CYB2-3
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
  
 
 0.818
CLCR_05277
Putative cytochrome; Belongs to the cytochrome b5 family.
  
 
 0.818
CYB2-4
Cytochrome b2, mitochondrial.
  
 
 0.818
CYB2-5
Cytochrome b2, mitochondrial.
  
 
 0.818
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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