STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02499Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
CLCR_02425
Uncharacterized protein.
 
     0.948
pkaR
cAMP-dependent protein kinase regulatory subunit.
   
 0.931
nte1
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
   
 0.874
CLCR_09501
Phosphodiesterase.
   
 0.821
gsk3
Protein kinase gsk3; Belongs to the protein kinase superfamily.
   
 0.724
CLCR_10586
Uncharacterized protein.
    
 0.688
CLCR_04748
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.673
CLCR_04495
Serine threonine protein kinase.
   
  0.673
rasC
Ras-like protein rasC.
    
 0.672
ATG8
Autophagy-related protein.
   
 
 0.658
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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