STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_02517Amidase domain-containing protein. (356 aa)    
Predicted Functional Partners:
CLCR_02590
Uncharacterized protein.
 
     0.945
CLCR_03406
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.888
Dars2
Aspartate--tRNA ligase, mitochondrial.
  
 0.761
gltX
Glutamate--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.651
CLCR_01513
Putative glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.635
qrs1
Putative glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.635
SLM5
Asparagine--tRNA ligase, mitochondrial.
   
 0.578
CLCR_01070
Aspartate-tRNA ligase.
   
 0.575
DED81
Asparagine--tRNA ligase, cytoplasmic.
   
 0.575
CLCR_04548
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.575
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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