STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03254Sec7 domain containing protein. (1433 aa)    
Predicted Functional Partners:
CLCR_05345
SEC7 domain-containing protein.
  
 
0.855
ARL1
ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.801
sec71
Protein transport protein sec71.
     
0.799
CLCR_04705
Uncharacterized protein.
    
 0.785
ARF
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.785
ARF6
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.691
CLCR_01034
Guanyl-nucleotide exchange factor.
   
 
0.683
CLCR_01701
Ras-related protein Rab-11B.
    
 0.440
sec24
Protein transport protein sec24.
  
 
 0.437
mesA
Protein mesA.
      
 0.436
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.