STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03342Btz domain-containing protein. (685 aa)    
Predicted Functional Partners:
CLCR_01389
ANK_REP_REGION domain-containing protein.
   
  0.563
CLCR_03301
ZZ type zinc finger domain protein.
 
  
  0.547
CLCR_04667
Putative transgelin.
  
  0.499
CLCR_00554
Uncharacterized protein.
  
 
  0.481
CLCR_08017
Uncharacterized protein.
  
 
  0.470
CLCR_07946
Uncharacterized protein.
  
 
   0.465
SEC16
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
  
 
  0.464
CLCR_05613
Uncharacterized protein.
  
 
  0.459
mnh1
Protein mago nashi like protein.
    
  0.455
rpn11
26S proteasome regulatory subunit rpn11.
    
  0.451
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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