STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03727BHLH family transcription factor. (165 aa)    
Predicted Functional Partners:
CLCR_07887
UDP-N-acetylglucosaminyltransferase.
    
  0.810
CLCR_00446
Uncharacterized protein.
    
  0.746
sal3
Importin subunit beta-3.
    
   0.615
CLCR_01553
Putative clock controled protein (Ccg-8).
    
 
 0.568
CLCR_05817
Putative ATP-citrate synthase subunit 2.
     
 0.534
CLCR_05548
Putative ATP-citrate synthase subunit 1.
     
 0.534
CLCR_00476
14-3-3 protein like protein; Belongs to the 14-3-3 family.
    
   0.487
CLCR_03622
14-3-3 protein like protein; Belongs to the 14-3-3 family.
    
   0.487
OPI3
Phosphatidyl-N-methylethanolamine N-methyltransferase; Catalyzes the second two steps of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylmonomethylethanolamine (PMME) to phosphatidyldimethylethanolamine (PDME) and of PDME to phosphatidylcholine (PC).
    
 
 0.485
cho2
Phosphatidylethanolamine N-methyltransferase; Catalyzes the first step of the methylation pathway of phosphatidylcholine biosynthesis, the SAM-dependent methylation of phosphatidylethanolamine (PE) to phosphatidylmonomethylethanolamine (PMME); Belongs to the class VI-like SAM-binding methyltransferase superfamily. CHO2 family.
      
 0.472
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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