STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03386Putative amino-acid permease PB24D3.02c. (522 aa)    
Predicted Functional Partners:
trpC
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 
 0.571
CLCR_07247
NADH pyrophosphatase.
    
  0.558
CLCR_05614
Alpha-amylase.
    
  0.433
amyS
Alpha-amylase.
    
  0.433
MAL2
Alpha-glucosidase.
    
  0.433
mal1
Alpha-glucosidase.
    
  0.433
MAL2-2
Alpha-glucosidase.
    
  0.433
CLCR_07049
Alpha-amylase.
    
  0.433
ags1
Cell wall alpha-1,3-glucan synthase ags1.
    
  0.433
mal1-2
Alpha-glucosidase.
    
  0.433
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.