STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kduD2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase. (261 aa)    
Predicted Functional Partners:
fabG-9
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
0.920
nodG
Nodulation protein G.
   
 
0.914
CLCR_01190
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.841
CLCR_09207
Putative ribose 5-phosphate isomerase.
   
 
  0.810
LRA2
L-rhamnono-gamma-lactonase.
     
 0.786
CLCR_04086
3-ketosteroid reductase.
     
 0.778
CLCR_10578
Protein DFG10.
     
 0.732
CLCR_03017
3-oxo-5-alpha-steroid 4-dehydrogenase family protein.
     
 0.717
CLCR_09797
Pisatin demethylase; Belongs to the cytochrome P450 family.
   
 
  0.710
kduD-3
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
  
 
 
0.674
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.