Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_02903 | CLCR_03644 | A0A1C1D2Z2 | A0A1C1CGH2 | DUF866 domain protein. | FRG1-like family protein. | 0.732 |
CLCR_02903 | CLCR_04547 | A0A1C1D2Z2 | A0A1C1CL36 | DUF866 domain protein. | Nuclear ribonucleoprotein. | 0.996 |
CLCR_02903 | Cdc40 | A0A1C1D2Z2 | A0A1C1CEA8 | DUF866 domain protein. | Pre-mRNA-processing factor 17. | 0.987 |
CLCR_02903 | Prpf8 | A0A1C1D2Z2 | A0A1C1CNQ0 | DUF866 domain protein. | Pre-mRNA-processing-splicing factor 8. | 0.995 |
CLCR_02903 | SmE | A0A1C1D2Z2 | A0A1C1C7Y4 | DUF866 domain protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
CLCR_02903 | cwc22 | A0A1C1D2Z2 | A0A1C1CS21 | DUF866 domain protein. | Pre-mRNA-splicing factor cwc22. | 0.922 |
CLCR_02903 | cwf8 | A0A1C1D2Z2 | A0A1C1C9Z1 | DUF866 domain protein. | Pre-mRNA-splicing factor cwf8. | 0.989 |
CLCR_02903 | prp46 | A0A1C1D2Z2 | A0A1C1C8W8 | DUF866 domain protein. | Pre-mRNA-splicing factor prp46. | 0.962 |
CLCR_02903 | smd1 | A0A1C1D2Z2 | A0A1C1CYG2 | DUF866 domain protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
CLCR_02903 | syf2 | A0A1C1D2Z2 | A0A1C1CZM4 | DUF866 domain protein. | Pre-mRNA-splicing factor syf2. | 0.923 |
CLCR_03644 | CLCR_02903 | A0A1C1CGH2 | A0A1C1D2Z2 | FRG1-like family protein. | DUF866 domain protein. | 0.732 |
CLCR_03644 | CLCR_04547 | A0A1C1CGH2 | A0A1C1CL36 | FRG1-like family protein. | Nuclear ribonucleoprotein. | 0.710 |
CLCR_03644 | Cdc40 | A0A1C1CGH2 | A0A1C1CEA8 | FRG1-like family protein. | Pre-mRNA-processing factor 17. | 0.777 |
CLCR_03644 | Prpf8 | A0A1C1CGH2 | A0A1C1CNQ0 | FRG1-like family protein. | Pre-mRNA-processing-splicing factor 8. | 0.860 |
CLCR_03644 | SmE | A0A1C1CGH2 | A0A1C1C7Y4 | FRG1-like family protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.699 |
CLCR_03644 | cwc22 | A0A1C1CGH2 | A0A1C1CS21 | FRG1-like family protein. | Pre-mRNA-splicing factor cwc22. | 0.959 |
CLCR_03644 | cwf8 | A0A1C1CGH2 | A0A1C1C9Z1 | FRG1-like family protein. | Pre-mRNA-splicing factor cwf8. | 0.806 |
CLCR_03644 | prp46 | A0A1C1CGH2 | A0A1C1C8W8 | FRG1-like family protein. | Pre-mRNA-splicing factor prp46. | 0.689 |
CLCR_03644 | smd1 | A0A1C1CGH2 | A0A1C1CYG2 | FRG1-like family protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.727 |
CLCR_03644 | syf2 | A0A1C1CGH2 | A0A1C1CZM4 | FRG1-like family protein. | Pre-mRNA-splicing factor syf2. | 0.712 |
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