STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03506Succinate--hydroxymethylglutarate CoA-transferase. (462 aa)    
Predicted Functional Partners:
CLCR_11311
Uncharacterized protein.
   
 0.681
SCP2
Fatty acid-binding protein.
  
 
 0.612
SCP2-2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.612
SCP2-3
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.612
etr1
Putative trans-2-enoyl-CoA reductase, mitochondrial.
     
 0.593
kduD-3
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
    
 0.542
SDH2
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
 0.538
GCDH
Glutaryl-CoA dehydrogenase, mitochondrial.
 
 
 
 0.521
PEX12
Peroxisome assembly protein 12.
    
 0.502
CLCR_04859
Peroxisomal docking factor component Pex13-Penicillium chrysogenum.
    
  0.500
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.