STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03363Acyl-CoA dehydrogenase. (437 aa)    
Predicted Functional Partners:
CLCR_04201
Putative electron transfer flavoprotein subunit alpha, mitochondrial.
  
 0.826
ETFB
Electron transfer flavoprotein subunit beta.
  
 0.810
NIAD
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.796
SCP2
Fatty acid-binding protein.
   
 0.790
SCP2-2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.790
SCP2-3
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.790
CLCR_01607
Acyl CoA binding protein.
   
 0.702
CLCR_11311
Uncharacterized protein.
  
 0.690
CLCR_02413
3-hydroxyisobutyrate dehydrogenase.
   
 0.679
CLCR_00290
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
 
 
 0.679
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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