STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03581Arginase; Belongs to the arginase family. (374 aa)    
Predicted Functional Partners:
otaA
Ornithine aminotransferase.
  
 0.976
davT-2
5-aminovalerate aminotransferase DavT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.964
CLCR_00459
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.905
argB
Ornithine carbamoyltransferase, mitochondrial; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.903
penDE
Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 40 kDa form.
  
 0.888
argx
Putative argininosuccinate lyase.
     
 0.887
CLCR_00301
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 
 0.869
CLCR_10756
Uncharacterized protein.
 
 
    0.849
lamA
Putative urea carboxylase.
    
 0.846
atzF
Allophanate hydrolase.
    
 0.846
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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