STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_0342260S ribosome biogenesis protein Rrp14. (538 aa)    
Predicted Functional Partners:
CLCR_02427
Brix domain-containing protein.
   
   0.987
NOG1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.981
ebp2
Putative rRNA-processing protein ebp2.
   
 
 0.980
CLCR_02961
RNA processing factor 1.
   
 
 0.980
CLCR_09140
Nucleolar Nop52.
   
 
 0.978
mak16
Protein MAK16; Belongs to the MAK16 family.
   
   0.977
rrp15
Ribosomal RNA-processing protein 15.
   
 
 0.971
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.955
rlp24
Ribosome biogenesis protein rlp24.
   
 
 0.951
CLCR_01311
Uncharacterized protein.
   
 
 0.947
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.