STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03265Putative nuclear import and export protein Msn5. (1263 aa)    
Predicted Functional Partners:
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.990
CLCR_09436
Nuclear pore complex protein.
    
 0.900
CLCR_06241
Uncharacterized protein.
    
 0.898
CLCR_01248
Uncharacterized protein.
    
 0.898
CLCR_06546
RanBD1 domain-containing protein.
   
 
 0.886
CLCR_00543
Peptidase S59 domain-containing protein.
   
 0.829
CLCR_06065
Putative nucleoporin NUP49/NSP49.
    
 0.822
CLCR_03947
Uncharacterized protein.
    
 0.822
NMD3
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
    
 
 0.758
CLCR_11286
WD domain-containing protein.
   
  0.745
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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