STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpsAAlpha,alpha-trehalose-phosphate synthase [UDP-forming] 1. (554 aa)    
Predicted Functional Partners:
TPS2
Trehalose-phosphatase.
  
0.996
CLCR_01815
Trehalose-phosphatase.
  
0.990
treB
Trehalase.
  
 0.955
CLCR_09668
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.918
fuy1
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.910
gbeA
1,4-alpha-glucan-branching enzyme.
  
 0.905
treA
Acid trehalase.
  
 0.868
CLCR_06658
Uncharacterized protein.
 
 
 0.820
fksA
1,3-beta-glucan synthase component FKS1.
     
 0.791
isn1
IMP-specific 5'-nucleotidase 1; IMP-specific 5'-nucleotidase involved in IMP (inositol monophosphate) degradation.
   
    0.770
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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