STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04367Putative mismatched base pair and cruciform DNA recognition protein. (180 aa)    
Predicted Functional Partners:
CLCR_03899
Glutamate--cysteine ligase.
   
 0.925
CLCR_09604
Glutamate--cysteine ligase.
   
 0.925
gsa1
Glutathione synthetase.
   
 0.851
NFS1
Cysteine desulfurase, mitochondrial.
 
   
  0.817
CLCR_09677
Tryptophan synthase.
    
  0.785
Got2
Aspartate aminotransferase.
   
  0.734
aat2
Aspartate aminotransferase.
   
  0.734
CDO1
Cysteine dioxygenase.
   
 
  0.724
CLCR_09930
Group II pyridoxal-5-phosphate decarboxylase.
   
 
  0.718
CYS4
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 0.619
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.