STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04247Aconitate hydratase. (309 aa)    
Predicted Functional Partners:
CLCR_02016
Putative Fe superoxide dismutase.
   
 
 0.964
MRPS8
37S ribosomal protein S8, mitochondrial.
   
 
 0.961
CLCR_06056
Mitochondrial 54S ribosomal protein YmL10/YmL18.
   
 
 0.958
CLCR_01698
Mitochondrial 54S ribosomal protein IMG1.
   
 
 0.958
CLCR_00944
60S ribosomal protein L25.
   
  0.957
CLCR_09011
Uncharacterized protein.
   
   0.955
mrpl7
Putative 54S ribosomal protein L7, mitochondrial.
   
 
 0.954
CLCR_02576
Uncharacterized protein.
   
 
 0.952
mrpl8
54S ribosomal protein L8, mitochondrial; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.951
RSM19
37S ribosomal protein S19, mitochondrial; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.949
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.