CGA1 protein (Cladophialophora carrionii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CGA1

Guanine nucleotide-binding protein subunit alpha. (356 aa)

Predicted Functional Partners:

CLCR_05909

0.945

flbA

0.916

CLCR_09421

0.797

CLCR_00722

0.767

MAPK

0.742

hog1

0.729

rac1A

0.720

CLCR_09501

0.714

cdc42

0.710

Uchl3

0.697

Your Current Organism:

Cladophialophora carrionii

NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGA1	CLCR_00722	A0A1C1CHL1	A0A1C1C6V1	Guanine nucleotide-binding protein subunit alpha.	Uncharacterized protein.	0.767
CGA1	CLCR_05909	A0A1C1CHL1	A0A1C1C8Z4	Guanine nucleotide-binding protein subunit alpha.	Guanine nucleotide-binding protein subunit beta.	0.945
CGA1	CLCR_09421	A0A1C1CHL1	A0A1C1CYK8	Guanine nucleotide-binding protein subunit alpha.	Adenylate cyclase.	0.797
CGA1	CLCR_09501	A0A1C1CHL1	A0A1C1CZT6	Guanine nucleotide-binding protein subunit alpha.	Phosphodiesterase.	0.714
CGA1	MAPK	A0A1C1CHL1	A0A1C1CHC1	Guanine nucleotide-binding protein subunit alpha.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.742
CGA1	Uchl3	A0A1C1CHL1	A0A1C1C7J8	Guanine nucleotide-binding protein subunit alpha.	Ubiquitin carboxyl-terminal hydrolase.	0.697
CGA1	cdc42	A0A1C1CHL1	A0A1C1CCP6	Guanine nucleotide-binding protein subunit alpha.	Cell division control protein 42 like protein.	0.710
CGA1	flbA	A0A1C1CHL1	A0A1C1CSF5	Guanine nucleotide-binding protein subunit alpha.	Developmental regulator flbA.	0.916
CGA1	hog1	A0A1C1CHL1	A0A1C1CY88	Guanine nucleotide-binding protein subunit alpha.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.729
CGA1	rac1A	A0A1C1CHL1	A0A1C1CXB0	Guanine nucleotide-binding protein subunit alpha.	Rho-related protein rac1A.	0.720
CLCR_00722	CGA1	A0A1C1C6V1	A0A1C1CHL1	Uncharacterized protein.	Guanine nucleotide-binding protein subunit alpha.	0.767
CLCR_00722	CLCR_05909	A0A1C1C6V1	A0A1C1C8Z4	Uncharacterized protein.	Guanine nucleotide-binding protein subunit beta.	0.707
CLCR_00722	cdc42	A0A1C1C6V1	A0A1C1CCP6	Uncharacterized protein.	Cell division control protein 42 like protein.	0.858
CLCR_00722	rac1A	A0A1C1C6V1	A0A1C1CXB0	Uncharacterized protein.	Rho-related protein rac1A.	0.858
CLCR_05909	CGA1	A0A1C1C8Z4	A0A1C1CHL1	Guanine nucleotide-binding protein subunit beta.	Guanine nucleotide-binding protein subunit alpha.	0.945
CLCR_05909	CLCR_00722	A0A1C1C8Z4	A0A1C1C6V1	Guanine nucleotide-binding protein subunit beta.	Uncharacterized protein.	0.707
CLCR_05909	CLCR_09421	A0A1C1C8Z4	A0A1C1CYK8	Guanine nucleotide-binding protein subunit beta.	Adenylate cyclase.	0.855
CLCR_05909	CLCR_09501	A0A1C1C8Z4	A0A1C1CZT6	Guanine nucleotide-binding protein subunit beta.	Phosphodiesterase.	0.886
CLCR_05909	MAPK	A0A1C1C8Z4	A0A1C1CHC1	Guanine nucleotide-binding protein subunit beta.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.868
CLCR_05909	cdc42	A0A1C1C8Z4	A0A1C1CCP6	Guanine nucleotide-binding protein subunit beta.	Cell division control protein 42 like protein.	0.879