Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_01389 | CLCR_06724 | A0A1C1CAX9 | A0A1C1CPE2 | ANK_REP_REGION domain-containing protein. | Uncharacterized protein. | 0.419 |
CLCR_01389 | hus5 | A0A1C1CAX9 | A0A1C1CU53 | ANK_REP_REGION domain-containing protein. | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 0.741 |
CLCR_01389 | rpn11 | A0A1C1CAX9 | A0A1C1C704 | ANK_REP_REGION domain-containing protein. | 26S proteasome regulatory subunit rpn11. | 0.434 |
CLCR_01389 | sconC | A0A1C1CAX9 | A0A1C1CPZ9 | ANK_REP_REGION domain-containing protein. | E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family. | 0.419 |
CLCR_01389 | sed2 | A0A1C1CAX9 | A0A1C1CHX1 | ANK_REP_REGION domain-containing protein. | Tripeptidyl-peptidase sed2. | 0.563 |
CLCR_05489 | sed2 | A0A1C1C899 | A0A1C1CHX1 | Putative MHYT domain signaling protein. | Tripeptidyl-peptidase sed2. | 0.419 |
CLCR_05605 | sed2 | A0A1C1C904 | A0A1C1CHX1 | Uncharacterized protein. | Tripeptidyl-peptidase sed2. | 0.520 |
CLCR_06193 | CLCR_09168 | A0A1C1C712 | A0A1C1CUE2 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | 0.536 |
CLCR_06193 | LSM4 | A0A1C1C712 | A0A1C1CHZ6 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.514 |
CLCR_06193 | sed2 | A0A1C1C712 | A0A1C1CHX1 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Tripeptidyl-peptidase sed2. | 0.508 |
CLCR_06724 | CLCR_01389 | A0A1C1CPE2 | A0A1C1CAX9 | Uncharacterized protein. | ANK_REP_REGION domain-containing protein. | 0.419 |
CLCR_06724 | hus5 | A0A1C1CPE2 | A0A1C1CU53 | Uncharacterized protein. | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 0.679 |
CLCR_06724 | rpn11 | A0A1C1CPE2 | A0A1C1C704 | Uncharacterized protein. | 26S proteasome regulatory subunit rpn11. | 0.786 |
CLCR_06724 | sed2 | A0A1C1CPE2 | A0A1C1CHX1 | Uncharacterized protein. | Tripeptidyl-peptidase sed2. | 0.437 |
CLCR_09168 | CLCR_06193 | A0A1C1CUE2 | A0A1C1C712 | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.536 |
CLCR_09168 | LSM4 | A0A1C1CUE2 | A0A1C1CHZ6 | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.514 |
CLCR_09168 | sed2 | A0A1C1CUE2 | A0A1C1CHX1 | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | Tripeptidyl-peptidase sed2. | 0.508 |
LSM4 | CLCR_06193 | A0A1C1CHZ6 | A0A1C1C712 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.514 |
LSM4 | CLCR_09168 | A0A1C1CHZ6 | A0A1C1CUE2 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. | 0.514 |
LSM4 | sed2 | A0A1C1CHZ6 | A0A1C1CHX1 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Tripeptidyl-peptidase sed2. | 0.508 |
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