STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_03845Nuclear pore complex protein An-Nup82. (929 aa)    
Predicted Functional Partners:
CLCR_00543
Peptidase S59 domain-containing protein.
    
 0.960
CLCR_09436
Nuclear pore complex protein.
  
 
   0.917
CLCR_06831
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
 
      0.783
CLCR_06065
Putative nucleoporin NUP49/NSP49.
    
  0.771
CLCR_03947
Uncharacterized protein.
    
  0.771
CLCR_06241
Uncharacterized protein.
    
   0.701
CLCR_01248
Uncharacterized protein.
    
   0.701
CLCR_08254
Putative nuclear pore protein (SEH1); Belongs to the WD repeat SEC13 family.
     
 0.641
CLCR_04814
SAS4 domain-containing protein.
  
  
  0.478
CLCR_03336
Nsp1_C domain-containing protein.
    
  0.458
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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