Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_03810 | CLCR_04607 | A0A1C1CIG3 | A0A1C1CKF7 | Poly(A) polymerase. | mRNA cleavage and polyadenylation specificity factor complex subunit. | 0.578 |
CLCR_03810 | CLCR_08497 | A0A1C1CIG3 | A0A1C1CUF7 | Poly(A) polymerase. | Uncharacterized protein. | 0.603 |
CLCR_03810 | CLCR_10756 | A0A1C1CIG3 | A0A1C1CX30 | Poly(A) polymerase. | Uncharacterized protein. | 0.596 |
CLCR_03810 | CLCR_11381 | A0A1C1CIG3 | A0A1C1CUE0 | Poly(A) polymerase. | Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. | 0.596 |
CLCR_03810 | fal1 | A0A1C1CIG3 | A0A1C1CIX4 | Poly(A) polymerase. | ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. | 0.671 |
CLCR_03810 | pab1 | A0A1C1CIG3 | A0A1C1C916 | Poly(A) polymerase. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.777 |
CLCR_03810 | pho2 | A0A1C1CIG3 | A0A1C1D215 | Poly(A) polymerase. | 4-nitrophenylphosphatase. | 0.515 |
CLCR_03810 | rad3 | A0A1C1CIG3 | A0A1C1CTI5 | Poly(A) polymerase. | Protein kinase rad3; Belongs to the PI3/PI4-kinase family. | 0.666 |
CLCR_03810 | tif1 | A0A1C1CIG3 | A0A1C1CR14 | Poly(A) polymerase. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.675 |
CLCR_03810 | tif451 | A0A1C1CIG3 | A0A1C1CDS2 | Poly(A) polymerase. | Eukaryotic translation initiation factor 4E-1; Belongs to the eukaryotic initiation factor 4E family. | 0.707 |
CLCR_04607 | CLCR_03810 | A0A1C1CKF7 | A0A1C1CIG3 | mRNA cleavage and polyadenylation specificity factor complex subunit. | Poly(A) polymerase. | 0.578 |
CLCR_04607 | pab1 | A0A1C1CKF7 | A0A1C1C916 | mRNA cleavage and polyadenylation specificity factor complex subunit. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.497 |
CLCR_08497 | CLCR_03810 | A0A1C1CUF7 | A0A1C1CIG3 | Uncharacterized protein. | Poly(A) polymerase. | 0.603 |
CLCR_08497 | fal1 | A0A1C1CUF7 | A0A1C1CIX4 | Uncharacterized protein. | ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. | 0.858 |
CLCR_08497 | pab1 | A0A1C1CUF7 | A0A1C1C916 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.974 |
CLCR_08497 | tif1 | A0A1C1CUF7 | A0A1C1CR14 | Uncharacterized protein. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.937 |
CLCR_10756 | CLCR_03810 | A0A1C1CX30 | A0A1C1CIG3 | Uncharacterized protein. | Poly(A) polymerase. | 0.596 |
CLCR_10756 | fal1 | A0A1C1CX30 | A0A1C1CIX4 | Uncharacterized protein. | ATP-dependent RNA helicase fal1; Belongs to the DEAD box helicase family. | 0.419 |
CLCR_10756 | pab1 | A0A1C1CX30 | A0A1C1C916 | Uncharacterized protein. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.723 |
CLCR_10756 | tif1 | A0A1C1CX30 | A0A1C1CR14 | Uncharacterized protein. | ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family. | 0.674 |
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