STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04332Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
CLCR_10137
Putative RNA polymerase-associated protein LEO1.
    
 0.951
KLP1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.839
cut9
Anaphase-promoting complex subunit cut9.
    
 0.813
CLCR_11232
DOC domain-containing protein.
    
 0.812
bimE
Negative regulator of mitosis.
    
 0.811
CLCR_06662
Anaphase-promoting complex component Cut20/Apc4.
    
 0.811
CLCR_03894
Anaphase-promoting complex subunit Apc5.
    
 0.791
CLCR_02035
Anaphase promoting complex subunit 11.
    
 0.754
CLCR_09708
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.754
spt16
FACT complex subunit spt16.
    
 0.697
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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