STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARD1-2D-arabinitol dehydrogenase 1. (376 aa)    
Predicted Functional Partners:
xkiA
Putative D-xylulose kinase A.
  
 
 0.847
xdhA
Putative D-xylulose reductase A.
  
  
 
0.735
xdhA-2
D-xylulose reductase A.
  
  
 
0.733
trpC
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
 0.577
lcb2
Serine palmitoyltransferase 2.
  
 
 0.541
bioF
8-amino-7-oxononanoate synthase.
  
 
 0.541
lcb1
Serine palmitoyltransferase 1.
  
 
 0.541
hemA
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.541
CLCR_08027
Serine palmitoyltransferase 2.
  
 
 0.541
dak1
Dihydroxyacetone kinase 1.
   
 0.533
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.