STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCD2ATP-binding cassette sub-family D member 2. (748 aa)    
Predicted Functional Partners:
PXA1
Peroxisomal long-chain fatty acid import protein 2.
  
 
0.919
CLCR_08553
Putative peroxisomal membrane protein receptor Pex19.
    
 0.867
PEX3
Peroxisomal biogenesis factor 3.
   
 0.822
CLCR_02493
Putative peroxisomal membrane anchor protein (Pex14).
   
 0.805
CLCR_08293
Putative lysosomal cobalamin transporter.
    
 0.773
CLCR_10664
Putative peroxisomal biogenesis factor (PEX11).
   
 
 0.751
CLCR_04859
Peroxisomal docking factor component Pex13-Penicillium chrysogenum.
   
 
 0.746
PEX12
Peroxisome assembly protein 12.
   
 
 0.741
CLCR_01576
Peroxisomal membrane protein PEX16.
     
 0.737
PMP47B
Peroxisomal membrane protein PMP47B; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
 0.735
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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