STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLOT1Flotillin-like protein 1; Belongs to the band 7/mec-2 family. Flotillin subfamily. (491 aa)    
Predicted Functional Partners:
CLCR_02501
Stomatin-like protein.
     
 0.812
vps11
E3 ubiquitin-protein ligase PEP5.
 
      0.760
PHB2
Prohibitin.
     
 0.733
CLCR_04254
Uncharacterized protein.
    
  0.700
CLCR_04028
TPR Domain containing protein.
    
  0.700
CLCR_08813
Uncharacterized protein.
    
  0.700
CLCR_02792
Uncharacterized protein.
    
  0.700
CLCR_05915
NYN domain-containing protein.
    
 0.697
CLCR_07882
Uncharacterized protein.
    
  0.685
CLCR_10499
Putative mannosylphosphorylation protein (Mnn4).
     
 0.682
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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