STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04881BAH domain-containing protein. (438 aa)    
Predicted Functional Partners:
HHT1
Histone H3; Belongs to the histone H3 family.
    
 0.991
CLCR_02433
GRF zinc finger domain-containing protein.
    
 0.991
CLCR_07668
Uncharacterized protein.
    
 0.991
CLCR_10124
Tat pathway signal sequence.
    
 0.991
CLCR_08271
Uncharacterized protein.
   
 
 0.875
swd1
Set1 complex component swd1.
    
 
 0.866
SET1
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
   
 
 0.828
CLCR_04030
Uncharacterized protein.
   
 
 0.828
CLCR_06015
Putative WD repeat-containing protein.
    
 
 0.826
ssr2
SWI/SNF and RSC complexes subunit ssr2.
    
 
 0.713
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
Server load: low (30%) [HD]