STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04879BHLH domain-containing protein. (435 aa)    
Predicted Functional Partners:
NCR1
Niemann-Pick type C-related protein 1.
   
 0.908
kap95
Importin subunit beta-1.
    
  0.841
CLCR_10638
Uncharacterized protein.
     
 0.678
GSP1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
  0.637
CLCR_04914
HLH transcription factor.
    
 0.612
CLCR_04511
Uncharacterized protein.
    
 0.612
CLCR_02912
Uncharacterized protein.
    
 0.592
HMGR
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.464
TPA1
PKHD-type hydroxylase TPA1.
   
 
 0.452
KEX1-2
Protease KEX1; Belongs to the peptidase S8 family.
     
 0.441
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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