STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04525PHD finger domain protein. (1129 aa)    
Predicted Functional Partners:
CLCR_09074
Uncharacterized protein.
    
 0.985
CLCR_01038
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.932
esa1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.931
CLCR_03512
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.931
HHT1
Histone H3; Belongs to the histone H3 family.
    
 0.871
CLCR_09434
Chromodomain-helicase-DNA-binding protein.
    
 0.741
CLCR_05403
Telomere length regulation protein.
    
 
 0.719
CLCR_03882
Chromatin modification-related protein.
    
 0.672
CLCR_07162
Chromatin modification-related protein.
    
 0.672
CLCR_06714
Uncharacterized protein.
    
 0.672
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.