STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04823Abhydrolase_3 domain-containing protein. (508 aa)    
Predicted Functional Partners:
rvb1
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.893
swc4
SWR1-complex protein 4.
    
 0.886
rvb2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.884
CLCR_01106
Signal transducer.
    
 0.883
arp4
Actin-related protein 4; Belongs to the actin family.
    
 0.868
htz1
Histone H2A; Belongs to the histone H2A family.
    
 0.862
TRA1
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.845
CLCR_10524
Uncharacterized protein.
    
 0.821
CLCR_09074
Uncharacterized protein.
    
 0.788
arp6
Actin-like protein arp6; Belongs to the actin family.
    
   0.750
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.