STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04508Sensor histidine kinase/response regulator. (1279 aa)    
Predicted Functional Partners:
CLCR_04370
Putative phosphotransmitter protein Ypd1.
    
 0.634
DIN4
2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial.
    
 0.606
PDB1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.606
CLCR_05638
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
    
 0.561
CLCR_01202
Acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.544
KGD2
annotation not available
    
 0.544
Dbt
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.544
CLCR_08901
Integral membrane protein.
    
 0.544
CLCR_02936
Putative pyruvate dehydrogenase protein X component, mitochondrial.
    
 0.544
CLCR_11206
Putative pyridine nucleotide-disulfide oxidoreductase.
    
 0.536
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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