STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_04530Uncharacterized protein. (1095 aa)    
Predicted Functional Partners:
CLCR_04494
Separase.
   
 
 0.796
CLCR_00547
Checkpoint serine/threonine-protein kinase.
   
 
 0.743
CLCR_11286
WD domain-containing protein.
   
 
 0.674
slp1
WD repeat-containing protein slp1.
   
 
 0.674
Fzr1
Fizzy-related protein like protein.
   
 
 0.674
CLCR_01050
Putative calmodulin-binding protein Sha1.
   
  
 0.655
CLCR_04536
Protein kinase domain-containing protein.
   
 
  0.655
bimC
Kinesin-like protein bimC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.625
ndc80
Putative kinetochore protein ndc80.
   
  
 0.595
CLCR_05996
Mitotic checkpoint protein BUB3.2.
     
 0.586
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.