STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_05253Uncharacterized protein. (132 aa)    
Predicted Functional Partners:
CLCR_01389
ANK_REP_REGION domain-containing protein.
   
 0.894
CLCR_02357
Baculoviral IAP repeat-containing 2/3/4.
   
 0.780
CLCR_09916
Stress response regulator/HFS transcription factor.
    
 0.767
CLCR_06608
Putative Rho guanyl nucleotide exchange factor.
    
 0.749
CLCR_06912
Uncharacterized protein.
    
 0.740
STUB1
STIP1 like proteiny and U box-containing protein 1.
    
  0.736
CLCR_06167
Ubiquitin-like domain-containing protein.
    
  0.733
UBI4
Polyubiquitin.
    
  0.733
CLCR_10713
SH3 domain containing protein.
   
 0.729
CLCR_03301
ZZ type zinc finger domain protein.
   
 0.726
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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