STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
akr1Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (723 aa)    
Predicted Functional Partners:
AFG1
Protein AFG1.
 
      0.883
CLCR_05909
Guanine nucleotide-binding protein subunit beta.
    
 
 0.593
pfa3
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 
0.502
swf1
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.501
CLCR_04869
Palmitoyltransferase pfa4.
      
 0.491
QPCT
Peptide hydrolase; Belongs to the peptidase M28 family.
      
 0.483
vac8
Vacuolar protein 8.
   
  
 0.482
erf2
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.456
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.456
bcp1
Protein BCP1; Involved in nuclear export, actin cytoskeleton organization and vesicular transport; Belongs to the BCP1 family.
      
 0.451
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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