STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csnACOP9 signalosome complex subunit 1. (496 aa)    
Predicted Functional Partners:
csn5
COP9 signalosome complex subunit 5.
   
 0.999
csnG
COP9 signalosome complex subunit 7.
   
 0.999
csnB
COP9 signalosome complex subunit 2.
   
 0.999
csnC
COP9 signalosome complex subunit 3.
  
 0.999
csnF
COP9 signalosome complex subunit 6.
   
 0.999
CLCR_05264
Ubiquitin-like domain-containing protein.
    
 0.979
Roc1a
RING-box protein 1A.
   
 0.975
CLCR_05379
UV-damaged DNA binding protein.
    
 0.966
CLCR_07951
Putative 3-hydroxyisobutyrate dehydrogenase protein.
   
 0.954
CLCR_09587
Uncharacterized protein.
   
 0.954
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.