STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_06913Flavoprotein oxygenase. (605 aa)    
Predicted Functional Partners:
CLCR_01389
ANK_REP_REGION domain-containing protein.
   
  0.563
acrB
Putative ubiquitination network signaling protein acrB.
  
 
  0.548
CLCR_08194
Putative bZIP transcription factor.
  
 
   0.548
CLCR_06065
Putative nucleoporin NUP49/NSP49.
  
 
  0.534
CLCR_08627
14-3-3-like protein.
  
 
  0.529
CLCR_05677
Uncharacterized protein.
  
 
   0.509
CLCR_03245
Uncharacterized protein.
  
     0.508
CLCR_10342
Uncharacterized protein.
  
     0.505
CLCR_06617
C6 transcription factor.
 
  
  0.504
CLCR_00177
Deacetylase complex subunit Sds3.
  
 
   0.497
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.