STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCR_11334Putative arca-like protein. (668 aa)    
Predicted Functional Partners:
sds23
Protein sds23.
   
 0.686
SNF4
Nuclear protein SNF4.
   
 0.686
CLCR_00694
AMPK1_CBM domain-containing protein.
    
 0.685
CLCR_10006
Snf1 kinase complex beta-subunit Gal83.
    
 0.685
mip1
WD repeat-containing protein mip1.
    
 0.675
atg1
Serine/threonine-protein kinase atg1.
    
 0.661
CBSCBSPB3
CBS domain-containing protein CBSCBSPB3.
   
 0.651
CDC31
Cell division control protein 31.
    
 0.628
CETN1
Centrin-1.
    
 0.628
CLCR_02714
Rap-GAP domain-containing protein.
    
 0.607
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.