Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CLCR_01218 | CLCR_02252 | A0A1C1CCX2 | A0A1C1CF61 | Golgi reassembly stacking protein. | Intracellular transport protein. | 0.923 |
CLCR_01218 | CLCR_06030 | A0A1C1CCX2 | A0A1C1CAF9 | Golgi reassembly stacking protein. | Uncharacterized protein. | 0.850 |
CLCR_01218 | CLCR_06651 | A0A1C1CCX2 | A0A1C1CMR8 | Golgi reassembly stacking protein. | Uncharacterized protein. | 0.775 |
CLCR_01218 | CLCR_07712 | A0A1C1CCX2 | A0A1C1CMW3 | Golgi reassembly stacking protein. | Uncharacterized protein. | 0.775 |
CLCR_01218 | SEC13 | A0A1C1CCX2 | A0A1C1D2N9 | Golgi reassembly stacking protein. | Protein transport protein SEC13; Belongs to the WD repeat SEC13 family. | 0.592 |
CLCR_01218 | SEC16 | A0A1C1CCX2 | A0A1C1CQN8 | Golgi reassembly stacking protein. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.411 |
CLCR_01218 | SEC23 | A0A1C1CCX2 | A0A1C1CH05 | Golgi reassembly stacking protein. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.909 |
CLCR_01218 | sec24 | A0A1C1CCX2 | A0A1C1CHG4 | Golgi reassembly stacking protein. | Protein transport protein sec24. | 0.926 |
CLCR_02252 | CLCR_01218 | A0A1C1CF61 | A0A1C1CCX2 | Intracellular transport protein. | Golgi reassembly stacking protein. | 0.923 |
CLCR_02252 | CLCR_06030 | A0A1C1CF61 | A0A1C1CAF9 | Intracellular transport protein. | Uncharacterized protein. | 0.774 |
CLCR_02252 | CLCR_06651 | A0A1C1CF61 | A0A1C1CMR8 | Intracellular transport protein. | Uncharacterized protein. | 0.756 |
CLCR_02252 | CLCR_06839 | A0A1C1CF61 | A0A1C1CQG5 | Intracellular transport protein. | Uncharacterized protein. | 0.474 |
CLCR_02252 | CLCR_07712 | A0A1C1CF61 | A0A1C1CMW3 | Intracellular transport protein. | Uncharacterized protein. | 0.756 |
CLCR_02252 | SEC13 | A0A1C1CF61 | A0A1C1D2N9 | Intracellular transport protein. | Protein transport protein SEC13; Belongs to the WD repeat SEC13 family. | 0.499 |
CLCR_02252 | SEC16 | A0A1C1CF61 | A0A1C1CQN8 | Intracellular transport protein. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.679 |
CLCR_02252 | SEC23 | A0A1C1CF61 | A0A1C1CH05 | Intracellular transport protein. | Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. | 0.836 |
CLCR_02252 | sec24 | A0A1C1CF61 | A0A1C1CHG4 | Intracellular transport protein. | Protein transport protein sec24. | 0.855 |
CLCR_02252 | sec31 | A0A1C1CF61 | A0A1C1D0E0 | Intracellular transport protein. | Protein transport protein sec31. | 0.462 |
CLCR_06030 | CLCR_01218 | A0A1C1CAF9 | A0A1C1CCX2 | Uncharacterized protein. | Golgi reassembly stacking protein. | 0.850 |
CLCR_06030 | CLCR_02252 | A0A1C1CAF9 | A0A1C1CF61 | Uncharacterized protein. | Intracellular transport protein. | 0.774 |
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