STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DUS1tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]. (533 aa)    
Predicted Functional Partners:
CLCR_07960
Putative WD repeat-containing protein.
   
   0.837
NUG1
Nuclear GTP-binding protein NUG1.
   
    0.792
SAS10
Something about silencing protein 10.
   
    0.777
CLCR_08436
Uncharacterized protein.
   
    0.773
CLCR_02961
RNA processing factor 1.
   
    0.773
IMP4
U3 small nucleolar ribonucleoprotein IMP4.
   
    0.772
RRS1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
    0.772
CLCR_04287
CBF domain-containing protein.
   
    0.772
sof1
Protein sof1.
   
    0.771
NOC2
Nucleolar complex protein 2.
   
    0.770
Your Current Organism:
Cladophialophora carrionii
NCBI taxonomy Id: 86049
Other names: C. carrionii, CBS 160.54, Cladosporium carrionii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.